Contents
STATS_CAL gathers the statistics of the SAM.
- MAT_FDR = STATS_CAL (D, D_BAR, VEC_FALSE, DELTA) determines the
- delta : thresholds from which expressed observations are computed;
- prior probability that an observation is expressed;
- false called observations;
- the False Discovery Rate (FDR).
All those values are stacked into MAT_FDR ; they are computed based on the D (observed) scores, D_BAR (expected) scores, the limens of falsely called observations VEC_FALSE, and the preferred values of DELTA to include in the findings.
- [MAT_FDR, MAT_FDR_HDR] = STATS_CAL (D, D_BAR, VEC_FALSE, DELTA) returns the header MAT_FDR_HDR of the statistics container MAT_FDR.
VALUE MAT_FDR : the differential expressed observations' metrics.
MAT_FDR_HDR : the metric container's header.